Cellular Potts Models

Cellular Potts Models

by Marco Scianna, Luigi Preziosi
Released March 2013
Publisher(s): Chapman and Hall/CRC
ISBN: 9781466514799

Read it now on the O’Reilly learning platform with a 10-day free trial.

O’Reilly members get unlimited access to books, live events, courses curated by job role, and more from O’Reilly and nearly 200 top publishers.

Start your free trial

Book description

This work shows how the cellular Potts model can be used as a framework for model building and how extended models can achieve even better biological practicality, accuracy, and predictive power. It focuses on ways to integrate and interface the basic cellular Potts model at the mesoscopic scale with approaches that accurately model microscopic dynamics. These extensions are designed to create a nested and hybrid environment, where the evolution of a biological system is realistically driven by the constant interplay and flux of information between the different levels of description.

Table of contents

  1. Front Cover (1/2)
  2. Front Cover (2/2)
  3. Contents
  4. Preface (1/3)
  5. Preface (2/3)
  6. Preface (3/3)
  7. Part 1: Basic Cellular Potts Model and Applications
    1. Chapter 1: Basic CPM (1/3)
    2. Chapter 1: Basic CPM (2/3)
    3. Chapter 1: Basic CPM (3/3)
    4. Chapter 2: HGF-Induced Cell Scatter (1/4)
    5. Chapter 2: HGF-Induced Cell Scatter (2/4)
    6. Chapter 2: HGF-Induced Cell Scatter (3/4)
    7. Chapter 2: HGF-Induced Cell Scatter (4/4)
    8. Chapter 3: Mesothelial Invasion of Ovarian Cancer (1/3)
    9. Chapter 3: Mesothelial Invasion of Ovarian Cancer (2/3)
    10. Chapter 3: Mesothelial Invasion of Ovarian Cancer (3/3)
  8. Part II: Extended Cellular Potts Model and Applications
    1. Chapter 4: Extended Cellular Potts Model (1/4)
    2. Chapter 4: Extended Cellular Potts Model (2/4)
    3. Chapter 4: Extended Cellular Potts Model (3/4)
    4. Chapter 4: Extended Cellular Potts Model (4/4)
    5. Chapter 5: Wound Healing Assay (1/3)
    6. Chapter 5: Wound Healing Assay (2/3)
    7. Chapter 5: Wound Healing Assay (3/3)
    8. Chapter 6: Effect of Calcium—Related Pathways on Single Cell Motility (1/7)
    9. Chapter 6: Effect of Calcium—Related Pathways on Single Cell Motility (2/7)
    10. Chapter 6: Effect of Calcium—Related Pathways on Single Cell Motility (3/7)
    11. Chapter 6: Effect of Calcium—Related Pathways on Single Cell Motility (4/7)
    12. Chapter 6: Effect of Calcium—Related Pathways on Single Cell Motility (5/7)
    13. Chapter 6: Effect of Calcium—Related Pathways on Single Cell Motility (6/7)
    14. Chapter 6: Effect of Calcium—Related Pathways on Single Cell Motility (7/7)
    15. Chapter 7: Tumor-Derived Vasculogenesis (1/5)
    16. Chapter 7: Tumor-Derived Vasculogenesis (2/5)
    17. Chapter 7: Tumor-Derived Vasculogenesis (3/5)
    18. Chapter 7: Tumor-Derived Vasculogenesis (4/5)
    19. Chapter 7: Tumor-Derived Vasculogenesis (5/5)
    20. Chapter 8: Different Morphologies of Tumor Invasion Fronts (1/6)
    21. Chapter 8: Different Morphologies of Tumor Invasion Fronts (2/6)
    22. Chapter 8: Different Morphologies of Tumor Invasion Fronts (3/6)
    23. Chapter 8: Different Morphologies of Tumor Invasion Fronts (4/6)
    24. Chapter 8: Different Morphologies of Tumor Invasion Fronts (5/6)
    25. Chapter 8: Different Morphologies of Tumor Invasion Fronts (6/6)
    26. Chapter 9: Cell Migration in Extracellular Matrices (1/5)
    27. Chapter 9: Cell Migration in Extracellular Matrices (2/5)
    28. Chapter 9: Cell Migration in Extracellular Matrices (3/5)
    29. Chapter 9: Cell Migration in Extracellular Matrices (4/5)
    30. Chapter 9: Cell Migration in Extracellular Matrices (5/5)
    31. Chapter 10: Cancer Cell Migration in Matrix Microchannels (1/3)
    32. Chapter 10: Cancer Cell Migration in Matrix Microchannels (2/3)
    33. Chapter 10: Cancer Cell Migration in Matrix Microchannels (3/3)
  9. Part III: Appendix
    1. Appendix A: Computational Implementation
    2. Appendix B: Glossary (1/3)
    3. Appendix B: Glossary (2/3)
    4. Appendix B: Glossary (3/3)
    5. Appendix C: Parameter Values (1/2)
    6. Appendix C: Parameter Values (2/2)
    7. Appendix D: Color Insert (1/2)
    8. Appendix D: Color Insert (2/2)
  10. Bibliography (1/8)
  11. Bibliography (2/8)
  12. Bibliography (3/8)
  13. Bibliography (4/8)
  14. Bibliography (5/8)
  15. Bibliography (6/8)
  16. Bibliography (7/8)
  17. Bibliography (8/8)

Product information

  • Title: Cellular Potts Models
  • Author(s): Marco Scianna, Luigi Preziosi
  • Release date: March 2013
  • Publisher(s): Chapman and Hall/CRC
  • ISBN: 9781466514799