Genome Refactoring

Book description

None

Table of contents

  1. Genome Refactoring
    1. Synthesis Lectures on Synthetic Biology
    2. Abstract
    3. Keywords
    4. Preface
    5. Acknowledgments
    6. Contents
    7. Chapter 1 - Tools for Genome Engineering and Synthetic Biology
      1. 1.1 INTRODUCTION
      2. 1.2 DNA SYNTHESIS
      3. 1.3 ABSTRACTION AS A TOOL FOR MANAGING AND UNDERSTANDING BIOLOGICAL COMPLEXITY
      4. 1.4 STANDARDS
      5. 1.5 GENOME REFACTORING IN THE SERVICE OF SYNTHETIC BIOLOGY
      6. REFERENCES
    8. Chapter 2 - Bacteriophage as Templates for Refactoring
      1. 2.1 INTRODUCTION
      2. 2.2 T7 BACKGROUND
      3. 2.3 REBUILDING T7
      4. 2.4 M13 BACKGROUND
      5. 2.5 REBUILDING M13
      6. 2.6 REFLECTION ON M13 REFACTORING
      7. REFERENCES
    9. Chapter 3 - Methods/Teaching Protocols for M13 Reengineering
      1. 3.1 INTRODUCTION
      2. 3.2 GOALS AND OUTCOMES FOR “SIMPLE” GENETIC ENGINEERING OF M13
      3. 3.3 GOALS AND OUTCOMES FOR REFACTORING M13
      4. REFERENCES
    10. Chapter 4 - Writing and Speaking as Biological Engineers
      1. 4.1 INTRODUCTION
      2. 4.2 COMMUNICATIONS-INTENSIVE CLASSES AT MIT
      3. 4.3 LEARNING AND THE DEVELOPMENT OF PROFESSIONAL IDENTITY
      4. 4.4 WRITING AND SPEAKING ABOUT SYNTHETIC BIOLOGY
      5. 4.5 UNDERSTANDING STUDENTS’ EXPERIENCES WITH COMMUNICATING SYNTHETIC BIOLOGY
      6. 4.6 CONCLUSION
      7. REFERENCES
    11. Chapter 5 - Summary and Future Directions
      1. 5.1 SUMMARY
      2. 5.2 FUTURE DIRECTIONS
      3. REFERENCES
    12. Appendix A - Genome Engineering Essay Assignment (Spring 2007)
      1. ABSTRACT
      2. INTRODUCTION
      3. BODY: PARTS 1-3
      4. CONCLUSIONS OR SUMMARY
    13. Appendix B - Genome Engineering Assessment (Fall 2007)
      1. PART 1: REBUTTAL TO EDITORIAL
      2. PART 2: MINI-BUSINESS PLAN FOR THE REGISTRY OF STANDARD BIOLOGICAL PARTS
    14. Appendix C - Nuts and Bolts of Molecular Biology
      1. SECTION 1: VOCABULARY
      2. SECTION 2: MOLECULAR BIOLOGY
        1. Generally useful sites:
        2. DNA Sequencing
        3. DNA Synthesis
        4. Chemical Synthesis of Oligonucleotides
        5. Ligation and Transformation
        6. PCR
        7. Recombination
        8. Restriction Enzyme
        9. Phage Display
    15. Author Biographies

Product information

  • Title: Genome Refactoring
  • Author(s): Natalie Kuldell, Neal Lerner
  • Release date:
  • Publisher(s): Morgan & Claypool Publishers
  • ISBN: None