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Handbook of Graph Drawing and Visualization
book

Handbook of Graph Drawing and Visualization

by Roberto Tamassia
August 2013
Intermediate to advanced content levelIntermediate to advanced
862 pages
32h 20m
English
Chapman and Hall/CRC
Content preview from Handbook of Graph Drawing and Visualization
20.4. METABOLIC NETWORKS 631
databases [ABH94, KGKN02, OLP
+
00]. Visualizations of metabolic pathways should help
understanding the interconnections between metabolites, analyzin g the flow of substances
through the network and identifying main and alternative paths. The established presen-
tation styles and discussions with users result in several visualization requirements [Sch02]:
1. Parts of reactions: The display of substances and enzymes is application and
user-specific. Usually for main sub s tanc es their name, s tr u ct ur al formula or both
should be shown. Co-substances should be dis p layed using their name or abbre-
viation and enzymes should be represented by their name or EC-number [Int92].
2. Reactions: The reaction arrow(s) should b
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Publisher Resources

ISBN: 9781420010268