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Instant Cytoscape Complex Network Analysis How-to by Gang Su

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Export, save, and call it a day! (Intermediate)

We have now reached the grand finale of this book. The last recipe we need to accomplish is to save our work for later use, share it with collaborators, and export to other programs for other tasks. You can easily export your workspace from Cytoscape into a variety of formats. So let me show you how it can be done!

Getting ready

Get Cytoscape up and running, and load your network. If you don't have anything particular in mind, simply load our old friend galFiltered.cys.

How to do it...

Here's how it's done:

  1. If you would like to save the current workspace session, then going to File | Save or File | Save as… will save a network to a new session.
  2. Let's try to export the network in one of the other formats. ...

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