June 2015
Intermediate to advanced
306 pages
6h 50m
English
Content preview from Bioinformatics with Python CookbookBecome an O’Reilly member and get unlimited access to this title plus top books and audiobooks from O’Reilly and nearly 200 top publishers, thousands of courses curated by job role, 150+ live events each month,
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Animating with PyMol
Here, we will create a video of the p53 1TUP model. We will start our animation by going around the p53 1TUP model and then zooming in; as we zoom in, we change the render strategy so that you can see what is deep in the model. You can find the YouTube version of the video that you will generate at https://www.youtube.com/watch?v=CuEP40Id9O8.
Getting ready
This is the first case in which there is no IPython Notebook. Integration into IPython Notebook is not a problem, but as we will use Anaconda as a backend and PyMol does not play very well out of the box, we will use standard Python here. Assuming that you are using the Anaconda Python, if something does not work, I suggest you revert to the standard Python.
You will need to ...
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