Appendix C

Introduction to ImageJ

C.1 Introduction

In all our discussions, we have used Python for image processing. There are many circumstances where it will be helpful to view the image so that it will be easy to prototype the algorithm that needs to be written in Python for processing. There are many such software programs, the most popular and powerful being ImageJ. This appendix serves as an introduction to ImageJ. Interested readers are encouraged to check the ImageJ documentation for more details at their website [43].

ImageJ is a Java based image processing software. Its popularity is due to the fact that it has an open architecture that can be extended by using Java and macros. Due to its open nature, there are many plug-ins written ...

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