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Open Source Software in Life Science Research by M Forster, L Harland

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6

Integrated data analysis with KNIME

Thorsten Meinl, Bernd Jagla and Michael R. Berthold

Abstract:

In this chapter the open source data analysis platform KNIME is presented. KNIME allows the user to create workflows for processing and analyzing almost any kind of data. There is a short introduction to KNIME and its key concepts such as nodes and views, followed by a short review of KNIME's history, and the origin and key aspects of its success today. Finally, several real-world applications of KNIME are presented. These examples include workflows from the fields of chemoinformatics and bioinformatics, and image processing. All these workflows apply freely available extensions to the basic KNIME distribution contributed by community members. ...

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