Skip to Content
The R Book
book

The R Book

by Michael J. Crawley
June 2007
Beginner to intermediate
950 pages
27h 8m
English
Wiley
Content preview from The R Book

Metapopulation dynamics

The theory is very simple. The world is divided up into many patches, all of which are potentially habitable. Populations on inhabited patches go extinct with a density-independent probability, e. Occupied patches all contain the same population density, and produce migrants (propagules) at a rate m per patch. Empty patches are colonized at a rate proportional to the total density of propagules and the availability of empty patches that are suitable for colonization. The response variable is the proportion of patches that are occupied, p. The dynamics of p, therefore, are just gains minus losses, so

images

At equilibrium dp/dt = 0, and so

images

giving the equilibrium proportion of occupied patches p* as

images

This draws attention to a critical result: there is a threshold migration rate (m = e) below which the metapopulation cannot persist, and the proportion of occupied patches will drift inexorably to zero. Above this threshold, the metapopulation persists in dynamic equilibrium with patches continually going extinct (the mean lifetime of a patch is 1/e) and other patches becoming colonized by immigrant propagules.

The simulation produces a moving cartoon of the occupied (light ...

Become an O’Reilly member and get unlimited access to this title plus top books and audiobooks from O’Reilly and nearly 200 top publishers, thousands of courses curated by job role, 150+ live events each month,
and much more.

Read now

Unlock full access

More than 5,000 organizations count on O’Reilly

AirBnbBlueOriginElectronic ArtsHomeDepotNasdaqRakutenTata Consultancy Services

QuotationMarkO’Reilly covers everything we've got, with content to help us build a world-class technology community, upgrade the capabilities and competencies of our teams, and improve overall team performance as well as their engagement.
Julian F.
Head of Cybersecurity
QuotationMarkI wanted to learn C and C++, but it didn't click for me until I picked up an O'Reilly book. When I went on the O’Reilly platform, I was astonished to find all the books there, plus live events and sandboxes so you could play around with the technology.
Addison B.
Field Engineer
QuotationMarkI’ve been on the O’Reilly platform for more than eight years. I use a couple of learning platforms, but I'm on O'Reilly more than anybody else. When you're there, you start learning. I'm never disappointed.
Amir M.
Data Platform Tech Lead
QuotationMarkI'm always learning. So when I got on to O'Reilly, I was like a kid in a candy store. There are playlists. There are answers. There's on-demand training. It's worth its weight in gold, in terms of what it allows me to do.
Mark W.
Embedded Software Engineer

You might also like

The R Book, 2nd Edition

The R Book, 2nd Edition

Michael J. Crawley
The R Book, 3rd Edition

The R Book, 3rd Edition

Elinor Jones, Simon Harden, Michael J. Crawley
R Data Analysis Cookbook, Second Edition - Second Edition

R Data Analysis Cookbook, Second Edition - Second Edition

Kuntal Ganguly, Davor Lozić, Mzabalazo Z. Ngwenya, Andrew Bauman, Shanthi Viswanathan, Viswa Viswanathan

Publisher Resources

ISBN: 9780470510247Purchase book