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BioCoder #9
book

BioCoder #9

by O'Reilly Media, Inc.
October 2015
Intermediate to advanced
56 pages
1h 23m
English
O'Reilly Media, Inc.
Content preview from BioCoder #9

Chapter 4. FlySorter

An Automated Drosophila Classification System

I keep a wine fridge in my spare bedroom, and it’s full of fruit flies. On purpose.

Figure 4-1. The author’s Drosophila storage system

Just a few feet away from these unsuspecting flies is the prototype of a machine designed to efficiently isolate, image, and classify them, all in the name of science.

Drosophila melanogaster—commonly referred to as fruit flies or vinegar flies—are one of the most frequently used model organisms in biological research (Dietrich et al, 2014), in no small part because they are easy to keep and care for. They need little besides an inexpensive food source (which also serves as hydration) and space to grow, and then they multiply quickly. A 12” x 12” tray of small plastic vials can hold thousands of flies, each fly a tiny experimental subject. For under $100 total—for flies, vials, food, and, if you’re feeling rich, a $70 wine fridge from Craigslist—anyone can work with Drosophila.

Flies were first used to study genetics over 100 years ago, and researchers have developed powerful tools and systems that allow them to learn about disease, development, behavior, neuroscience, and much more, all using the humble fly (Stephenson & Metcalfe, 2013). For all the tools at scientists’ disposal, however, there is still a great deal of manual labor involved in fly experiments (Greenspan, ...

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Publisher Resources

ISBN: 9781098105563Errata Page