Skip to Content
Bioinformatics Programming Using Python
book

Bioinformatics Programming Using Python

by Mitchell L Model
December 2009
Intermediate to advanced
521 pages
15h 26m
English
O'Reilly Media, Inc.
Content preview from Bioinformatics Programming Using Python

Appendix B. Collection Type Summary

This appendix provides a compact summary of (most of) Python’s collection types. It describes the characteristics and methods of each collection and the operators and functions used with collection values. At the end of the appendix, you will find summaries of the collection iteration templates shown in Chapter 4.

Types and General Operations

Table B-1 summarizes the characteristics of Python’s most commonly used collection types. The column labeled “Syntax” shows examples of two-element collections, with e1 and e2 representing elements of any type and k1 and k2 representing instances of an immutable type.

Table B-1. Collection types

Element access

Name

Type

Element type

Mutable?

Syntax

Unordered unique elements

Set

set

Any immutable

Yes

{k1, k2}

Frozenset

frozenset

Any immutable

No

None

Ordered (indexed)

String

str

One-character strings[a]

No

'ac' "ac"

'''ac''' """ac"""

Bytes

bytes

8-bit bytes[b]

No

b'ac' b"ac"

b'''ac''' b"""ac"""

Bytearray

bytearray

8-bit bytes

Yes

None

Range

range

Integers

No

None

Tuple

tuple

Any

No

(e1, e2)

List

list

Any

Yes

[e1, e2]

Associative

Dictionary

dict

Keys immutable, values any

Yes

{k1:e1,

k2:e2}

Stream (next)

File object

Depends[c]

Characters, bytes, lines

Depends on use

None

[a] Strings don’t really “contain” characters or one-character strings, but for many purposes they behave as if they do.

[b] Bytes are equivalent to the integers from 0 through 255.

[c] The type of the object returned by open is an instance of the class from the IO library; it isn’t one of the built-in collection ...

Become an O’Reilly member and get unlimited access to this title plus top books and audiobooks from O’Reilly and nearly 200 top publishers, thousands of courses curated by job role, 150+ live events each month,
and much more.
Start your free trial

You might also like

Bioinformatics with Python Cookbook - Third Edition

Bioinformatics with Python Cookbook - Third Edition

Tiago Antao

Publisher Resources

ISBN: 9780596804725Supplemental ContentErrata Page