Profiling GATK
This appendix provides details about the profiling of the Genome Analysis Toolkit (GATK) workflow, which is described in 5.1, “The Broad Institute Genome Analysis Toolkit (GATK)” on page 44.
 
Note: The product release levels indicated in this appendix were the ones used in the lab environment for this paper.
Figure A-1 shows step one of the Application Workflow, Mapping to reference genome using BWA MEM.
Figure A-1 Application ...

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