Gephi
Gephi is an interactive visualization and exploration platform for all kinds of networks and complex systems, dynamic graphs, and hierarchical graphs. It is developed by the Gephi Consortium, a not-for-profit legal entity in France created to ensure future developments of Gephi. They aim to develop a number of tools in an open source ecosystem, focused on the visualization and analysis of large networks in real time. Their tagline, Like Photoshop but for data, gives you a good feel of what they want to do: Gephi helps data analysts intuitively reveal patterns and trends, highlight outliers, and tell stories with their data.
The toolset runs on Windows, Linux, and Mac OS X and has a very extensible architecture (NetBeans platform plugins) ...
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