June 2015
Intermediate to advanced
306 pages
6h 50m
English
Content preview from Bioinformatics with Python CookbookBecome an O’Reilly member and get unlimited access to this title plus top books and audiobooks from O’Reilly and nearly 200 top publishers, thousands of courses curated by job role, 150+ live events each month,
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Investigating population structure with Admixture
A typical analysis in population genetics was the one popularized by the program Structure (http://pritchardlab.stanford.edu/structure.html), which is used to study the population structure. This type of software is used to infer how many populations exist (or how many ancestral populations generate the current population) and how to identify potential migrants and admixed individuals. As Structure was developed quite some years ago when much less markers were genotyped (at that time, mostly a handful of microsatellites) and faster versions were developed, including one from the same laboratory called fastStructure (http://rajanil.github.io/fastStructure/). Here, we will use Python to interface ...
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I wanted to learn C and C++, but it didn't click for me until I picked up an O'Reilly book. When I went on the O’Reilly platform, I was astonished to find all the books there, plus live events and sandboxes so you could play around with the technology.Addison B.
I’ve been on the O’Reilly platform for more than eight years. I use a couple of learning platforms, but I'm on O'Reilly more than anybody else. When you're there, you start learning. I'm never disappointed.Amir M.
I'm always learning. So when I got on to O'Reilly, I was like a kid in a candy store. There are playlists. There are answers. There's on-demand training. It's worth its weight in gold, in terms of what it allows me to do.