November 2018
Intermediate to advanced
360 pages
9h 36m
English
Content preview from Bioinformatics with Python Cookbook - Second Edition
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Exploring a dataset with Bio.PopGen
In this recipe, we will perform an initial exploratory analysis of one of our generated datasets.
We will analyze the 10 percent sampling of chromosome 2 without the offspring. We will look for monomorphic loci (in this case, SNPs) across populations, along with how to research minimum allele frequencies and expected heterozygosites.