November 2018
Intermediate to advanced
360 pages
9h 36m
English
Content preview from Bioinformatics with Python Cookbook - Second Edition
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Python for Big Genomics Datasets
In this chapter, we will cover the following recipes:
- Using high-performance data formats – HDF5
- Doing parallel computing with Dask
- Using high-performance data formats – Parquet
- Computing sequencing statistics using Spark
- Optimizing code with Cython and Numba