November 2018
Intermediate to advanced
360 pages
9h 36m
English
Content preview from Bioinformatics with Python Cookbook - Second Edition
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Simulating population structure using island and stepping-stone models
We will now simulate population structure. Let's start with an island model and then create a one-dimensional stepping-stone model. We will study FST behavior on these models and distinguish between deme-level statistics and meta-population level statistics. Strictly speaking, we will simulate fragmentation models by splitting into islands or stepping-stones.