Bioinformatics with Python Cookbook - Second Edition

Conventions used

There are a number of text conventions used throughout this book.

CodeInText: Indicates code words in text, database table names, folder names, filenames, file extensions, pathnames, dummy URLs, user input, and Twitter handles. Here is an example: "We will read the data from our file using R's read.delim function."

A block of code is set as follows:

import osfrom IPython.display import Imageimport rpy2.robjects as robjectsimport pandas as pdfrom rpy2.robjects import pandas2ri

Any command-line input or output is written as follows:

conda install r-essentials r-gridextra

Bold: Indicates a new term, an important word, or words that you see onscreen. For example, words in menus or dialog boxes appear in the text like this. Here ...