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云端基因组学
book

云端基因组学

by Geraldine A. Van der Auwera, Brian D. O’Connor
April 2022
Beginner to intermediate
486 pages
10h 22m
Chinese
China Electric Power Press Ltd.
Content preview from 云端基因组学
416
13
我们应该能用自己工作区的数据。我们对此既已感到满足,那就接着思考如何传输
信息。
13.3.4
从千人基因组工作区复制数据表
复制数据表的主要方法有两种:一是“指向—点击”法;二是加载文件法。我们从
方法一开始,因为它经过抽象,去掉加载文件法的一些复杂因素。
请在千人基因组高覆盖度工作区“
Data
”页,点击
sample
表,勾选样本左侧复选框
选几个样本。点击表格上方三点图标,打开操作菜单(方法同第
11
章工作流输入数
据配置)并选择“
Export to Workspace
”,如图
13-12
所示。
13
-
12
:“复制数据到工作区”对话框
这应该会打开一个对话框,框内给出样本列表并提供一个工作区选择菜单。请选择
你克隆的
GATK
工作区,接着点击“
Copy
”(复制)按钮。请记住尽管该按钮似乎
暗示我们将复制文件,但实际上并不会;我们只想复制数据表的元数据,其中包含
文件在
GCS
桶中位置的路径。因此不必担心,你不会突然为一大笔数据存储账单而
负责。
你应该看到一条确认消息,系统询问你是否想待在当前所处位置(千人基因组工作
区),还是要去往数据复制的目的地(
GATK
工作区)。请选后一项,这样我们可
查看我们转存的内容。如一切符合预期,你应该看到你从
sample
表选择的样本。然而,
我们从
participant
表看不到相应受试,因为系统不会自动复制所选数据引用的其他
表中的数据。唯一例外是集合,比如我们一直在用的样本集。如选择一个集合并复
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Publisher Resources

ISBN: 9787519864422